A bioinformatics pipeline to analyze mtDNA from NGS data
-
Updated
Mar 5, 2024 - Python
#
mitochondrial-variants
Here are 5 public repositories matching this topic...
Infer the dynamics of mitochondrial heteroplasmy during different life stages using population genetics and phylogenetics
-
Updated
Nov 1, 2019 - Python
HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high-fidelity (HiFi) reads or Circular Consensus Sequencing (ccs) data, to a reference genome (i.e., the hypothetical master cycle DNA).
-
Updated
Oct 30, 2024 - Python
This workflow performs a variant analysis on mitochondrial genomes using the bcftools variant caller. For human samples, the workflow also performs a variant analysis using mutserve.
-
Updated
May 9, 2022 - Python
MitoX: exploring mitochondrial variants and gene expressions from single cell sequencing assays
-
Updated
Nov 11, 2020 - Python
Improve this page
Add a description, image, and links to the mitochondrial-variants topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the mitochondrial-variants topic, visit your repo's landing page and select "manage topics."