Skip to content

Issues: walaj/svaba

New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

#

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

72 Open 63 Closed
72 Open 63 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

segmentation fault - tovcf command
#141 opened Aug 19, 2024 by ahwanpandey
error while using exome mode
#140 opened Jul 27, 2024 by onurerdoganmd
missing make in Dockerfile
#139 opened Jul 3, 2024 by kandabarau
1
Error: Found chromosome in region file not in reference genome. Skipping
#138 opened May 24, 2024 by shguturu
5
Fastest mode to run svaba
#137 opened May 7, 2024 by CHOWDHURY098
version number not updated？
#136 opened Mar 14, 2024 by gudeqing
Unexpected SV with a zero coordinate
#134 opened Feb 22, 2024 by gudeqing
1
True deletion discarded in final vcf
#133 opened Feb 5, 2024 by yiqijiang17
Genotype quality
#131 opened Dec 14, 2023 by MikeWLloyd
2
Compiling error for missing header files
#129 opened Oct 13, 2023 by lye2
4
recommended parameters when one chr has higher coverage than the others
#128 opened Sep 9, 2023 by EHC2019
1
The target SV in *.svaba.sv.vcf is not found in *.alignments.txt.gz
#127 opened Jul 31, 2023 by hhd1008611
4
Number of sequences in BAM header mismatches reference
#126 opened Jul 25, 2023 by tnnandi
5
Installation issue
#124 opened Jul 12, 2023 by tnnandi
10
"Caught stoi/stod/stof error" in breakpoints file
#123 opened Jun 23, 2023 by catalinamed
Is it possible to infer duplications/deletions/translocations/insertions/inversions from SvABA output?
#116 opened Jul 22, 2022 by Giuseppe1995
2
"Duplicate" kgID when doing annotation.
#115 opened Jun 23, 2022 by sxwcasd
2
Extraction of variant types
#111 opened Feb 23, 2022 by Danisov
Recommendation of QUAL?
#109 opened Dec 15, 2021 by greekkey
2
SV and indel size cutoff
#108 opened Oct 22, 2021 by tgong1
ERROR: Unable to open index file: ucsc.hg19.fa, yet it's in the current directory.
#107 opened Oct 15, 2021 by jamesdalg
2
Plan to adapt for the use of long reads?
#106 opened Sep 17, 2021 by ehjChun
Questions about *alignments.txt.gz
#105 opened Aug 17, 2021 by yifnzhao
Missing and incomplete output VCF headers
#104 opened Jul 14, 2021 by fgvieira
Very large memory usage
#103 opened Jul 13, 2021 by fgvieira
1
ProTip! Find all open issues with in progress development work with linked:pr.