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flatironinstitute / CaImAn Public

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eftychios pnevmatikakis edited this page Aug 16, 2019 · 5 revisions

The wiki is slowly being phased out. Check our documentation instead.

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Toggle table of contents Pages 25

Home
Branches and merging
CaImAn features and references
CaImAn Notebook Interface (beta)
CaImAn Tips
Comparison
Dependencies
Handling Movies
Instructions for create anaconda installer
Interpreting Results
IPython notebook
Known Issues
Motion correction (rigid and piecewise rigid)
On Clustering
On file types and sizes
Processing large datasets
Python Basics
ROADMAP
Setting up Python and getting to know Spyder
Source extraction and deconvolution
Training Mask R CNN
Tutorial
Updating CaImAn
Updating Github pages docs
Updating ground truth

Tips

Tips for using CaImAn
File types and sizes

Troubleshooting

Updating CaImAn
Parallel Processing - Clustering
Known Issues

CaImAn Info and Tutorials

CaImAn Features
Motion Correction
Source Extraction and deconvolution
Handling movies
Comparisons
Interpreting Results
Training MASK R-CNNs

Python Basics

Installation and Spyder
Language basics
IPython notebook

Internal

Updating ground truth
Branches and merging
Updating Github pages docs

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