JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
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Updated
Mar 21, 2024 - JavaScript
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
A React web application to query and share any PostgreSQL database.
Fast, flexible and extensible genome browser.
Chromosome visualization for the web
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
A genome browser designed for complex structural variants and long reads.
Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.
A modular annotation tool for genomic variants
Framework for building fast genomics web tools with WebAssembly and WebWorkers
SplitThreader has moved into Ribbon!
CGView.js creates interactive circular and linear genome maps.
Simple web browser to visualize HiC tracks
Django website project for common sequence search tools.
Search and explore genomic metadata, Earth BioGenome Project progress and assembly features
Genome browser to visualize and analyze genomic data
Visual exploration of large genome interaction matrices with interactive small multiples.
Python-based UCSC genome browser snapshot-taker and gallery-maker
Genepanel.iobio: generate list of genes based on suspected conditions and phenotypes.
The repository contains the source code of the NanoForms server (Czmil et al. NanoForms: an integrated server for processing, analysis and assembly of raw sequencing data of microbial genomes, from Oxford Nanopore technology. PeerJ, 2022). It is meant to be the source for standalone server installation. https://doi.org/10.7717/peerj.13056
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