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Saranga Wijeratne edited this page Sep 19, 2018 · 18 revisions

16s Microbiome Analysis with Qiime2

  1. Software
  2. Quality Checking
  3. Illumina Adapter removal
  4. Sequence Primer Removal
  5. Import to Qiime
  6. Demultiplexed Statistics
  7. De nosing Data
  8. Phylogenetic Tree
  9. Alpha Beta Diversity
  10. Alpha Rarefaction
  11. Taxonomy Analysis

Get the repository to your local machine

git clone https://github.com/wijerasa/Qiime2_Pipeline.git